The detailed information of tRNA gene sequence


Sequence ID>C11122361
Genome IDCP002444
Search identical group
Phylum/ClassAquificota
SpeciesThermovibrio ammonificans HB-1 [CP002444]
Start position on genome 288952
End posion on genome 288876
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
caaccaatga
tRNA gene sequence 
GCGGGCGTAGCTCAGCTGGCTAGAGCATCAGCCTTCCAAGCTGAGGGTCGCGGGTTCGAA
TCCCGTCGCCCGCTCCA
Downstream region at tRNA end position 
tcctcccatt
Secondary structure (Cloverleaf model)
>C11122361	Gly	TCC
                   a      TCCA tcctcccatt
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T G C C C     A
      C G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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