The detailed information of tRNA gene sequence


Sequence ID>C11122363
Genome IDCP002444
Search identical group
Phylum/ClassAquificota
SpeciesThermovibrio ammonificans HB-1 [CP002444]
Start position on genome 50714
End posion on genome 50639
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
gcagcaaagc
tRNA gene sequence 
TCCCCGGTAGCTCAGCTGGTAGAGCGGGTGGCTGTTAACCACCAGGTCGCTGGTTCGAGC
CCGGCCCGGGGAGCCA
Downstream region at tRNA end position 
tttttattta
Secondary structure (Cloverleaf model)
>C11122363	Asn	GTT
                   c      GCCA tttttattta
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          C G
                    T     C G G C C     A
      C G A        A      | | + | |     G
    T       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    G - C
                    G - C
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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