The detailed information of tRNA gene sequence


Sequence ID>C11122413
Genome IDCP002696
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema brennaborense DSM 12168 [CP002696]
Start position on genome 604467
End posion on genome 604551
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttgcggttaa
tRNA gene sequence 
GGAAGCGTGGTAGAGCGGTAATACAACGGATTGCTAATCCGTCGGTTCTTCACAGGCCGG
GCAGGTTCGACTCCTGTCGCTTCCGttt
Downstream region at tRNA end position 
attttgagac
Secondary structure (Cloverleaf model)
>C11122413	Ser	GCT
                   a      Gttt attttgagac
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T C
                    T     T G T C C     A
        G A        G      + | | | |     G
      C     G A T G       G C A G G     C
      G       | | |                 T T
      G     A T A C
        T A        A     CGGTTCTTCACAGGCCGG
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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