The detailed information of tRNA gene sequence


Sequence ID>C11122416
Genome IDCP002696
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema brennaborense DSM 12168 [CP002696]
Start position on genome 604861
End posion on genome 604946
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgttgttttt
tRNA gene sequence 
GGAAAGATGTCCGAGTGGTCGATGGTGCAGTCTTGGAAAGGCTGTGTACCGAAAGGTACC
GGGGGTTCGAATCCCCCTCTTTCCGCtt
Downstream region at tRNA end position 
agtgatagtt
Secondary structure (Cloverleaf model)
>C11122416	Ser	GGA
                   t      GCtt agtgatagtt
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G G G G G     C
    G       + | |                   T T
    T       T G G T
      C G A        G     TGTACCGAAAGGTACC
                    C - G
                    A - T
                    G - C
                    T + G
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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