The detailed information of tRNA gene sequence


Sequence ID>C11122423
Genome IDCP002696
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema brennaborense DSM 12168 [CP002696]
Start position on genome 1597117
End posion on genome 1597200
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
tacggtatac
tRNA gene sequence 
GCCCGGATGGTGGAATTGGTAGACACGCTAGTTTCAGGTACTAGAGCTCGTAAGGGTGTG
CAAGTTCAAGTCTTGTTCCGGGCAgaa
Downstream region at tRNA end position 
ccggtttgta
Secondary structure (Cloverleaf model)
>C11122423	Leu	CAG
                   c      Agaa ccggtttgta
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T          T G
                    T     T G T T C     A
      T A A        G      + | | | |     A
    T       G G T G       G C A A G     C
    G         | | |                 T T
    G       A C A C
      T A G        G     AGCTCGTAAGGGTGT
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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