The detailed information of tRNA gene sequence


Sequence ID>C11122442
Genome IDCP002696
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema brennaborense DSM 12168 [CP002696]
Start position on genome 1742265
End posion on genome 1742191
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
agttaacttg
tRNA gene sequence 
GTGCCTGTAGTTCAGGGGTAGAGCACCAGATTGTGGATCTGGTTGTCGTGGGTTCGAAAC
CCACCAGGCACCCCT
Downstream region at tRNA end position 
caacgggtac
Secondary structure (Cloverleaf model)
>C11122442	His	GTG
                   g      CCCT caacgggtac
                     G - C
                     T - A
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          A A
                    T     C A C C C     A
        G A        A      | | | | |     G
      G     C T T G       G T G G G     C
      G     | | + |                 T T
      G     G A G C
        T A        A     TTGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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