The detailed information of tRNA gene sequence


Sequence ID>C11122447
Genome IDCP002696
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema brennaborense DSM 12168 [CP002696]
Start position on genome 1618850
End posion on genome 1618769
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
gaagtataac
tRNA gene sequence 
GGGGAGGTTCCCGAGCGGTCAAAGGGGGCAGACTGTAAATCTGTTGGCTCCGCCTTCGAA
GGTTCGAATCCTTCTCTCCCCAtct
Downstream region at tRNA end position 
ttcagggcgt
Secondary structure (Cloverleaf model)
>C11122447	Tyr	GTA
                   c      Atct ttcagggcgt
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T T C C     A
      C G A        T      | | | | |     G
    G       G C C C       G A A G G     C
    G         | | |                 T T
    T       A G G G
      C A A        G     TGGCTCCGCCTTC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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