The detailed information of tRNA gene sequence


Sequence ID>W11121358
Genome IDADOA01000214
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesAggregatibacter actinomycetemcomitans D17P-3 [ADOA]
Start position on genome 459
End posion on genome 553
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
atttccaaaa
tRNA gene sequence 
GGAAGATCGTCGTTTCCGGTGAGGCGGCAGGACTTCAAATCCTGTTGAGGCTGCCAGCAG
TCTCGGGTAGGTTCAACTCCTACGATCTTCCGCCA
Downstream region at tRNA end position 
acccacataa
Secondary structure (Cloverleaf model)
>W11121358	SeC(p)	TCA
                   a      GCCA acccacataa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     T - A
                     C - G          T C
                    G     C A T C C     A
      C C T        T      | | | | |     A
    G       T T G C       G T A G G     C
    G       + + | |                 T T
    T       G G C G
      G A          G     TTGAGGCTGCCAGCAGTCTCGG
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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