The detailed information of tRNA gene sequence


Sequence ID>C11122841
Genome IDCP002690
Search identical group
Phylum/ClassThermodesulfobiota
SpeciesThermodesulfobium narugense DSM 14796 [CP002690]
Start position on genome 285575
End posion on genome 285667
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tttgcttttt
tRNA gene sequence 
GGAGAGGTGCTGGAGTGGTCGAACAGGCTCGCCTGGAAAGCGTGTAGATGGCAAAAAACC
GTCTCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
ttttttatcc
Secondary structure (Cloverleaf model)
>C11122841	Ser	GGA
                   t      GCCA ttttttatcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G G T C       G A G G G     C
    G         | | |                 T T
    T       A C A G
      C G A        G     TAGATGGCAAAAAACCGTCTC
                    C - G
                    T   T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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