The detailed information of tRNA gene sequence


Sequence ID>C11122890
Genome IDCP002103
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema paraluiscuniculi Cuniculi A [CP002103]
Start position on genome 230339
End posion on genome 230415
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
ttttgaaaag
tRNA gene sequence 
GGGCTTGTAGCTCAGTTGGTTAGAGCACTTCTCTGATAAGGAAGGGGTCATTAGTTCAAC
TCTAATCAAGCCCACTA
Downstream region at tRNA end position 
ttattcttta
Secondary structure (Cloverleaf model)
>C11122890	Ile	GAT
                   g      ACTA ttattcttta
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     T - A
                     G - C          T C
                    T     T A A T C     A
      T G A        A      | | | | |     A
    T       C T C G       A T T A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    T + G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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