The detailed information of tRNA gene sequence


Sequence ID>C11122948
Genome IDCP001843
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema primitia ZAS-2 [CP001843]
Start position on genome 553618
End posion on genome 553706
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttccggtatT
tRNA gene sequence 
GGAGCGGTGTCCGAGTGGCCGAAGGAGATGGTTTCGAAAACCATTGAACCCGCGAGGGTT
CCGGGGGTTCGAATCCCCCCTGCTCCGAag
Downstream region at tRNA end position 
tgaagggggg
Secondary structure (Cloverleaf model)
>C11122948	Ser	CGA
                   T      GAag tgaagggggg
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G + T
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G G G G G     C
    G         | | |                 T T
    C       A G G A
      C G A        G     TGAACCCGCGAGGGTTCC
                    A - T
                    T - A
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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