The detailed information of tRNA gene sequence


Sequence ID>C11122953
Genome IDCP001843
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema primitia ZAS-2 [CP001843]
Start position on genome 784157
End posion on genome 784229
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
tcccagatac
tRNA gene sequence 
GGGGAATTAGCTCAGTTGGTAGAGCGATTGGTTCGCAATCAATAGGTCACCGGTTCGAAT
CCGGTATTCTCCAata
Downstream region at tRNA end position 
attattgtta
Secondary structure (Cloverleaf model)
>C11122953	Ala	CGC
                   c      Aata attattgtta
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     A - T
                     T - A          T A
                    T     T G G C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    A - T
                    T - A
                    T - A
                    G - C
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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