The detailed information of tRNA gene sequence


Sequence ID>C11122969
Genome IDCP001843
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema primitia ZAS-2 [CP001843]
Start position on genome 3409426
End posion on genome 3409353
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
gtgatgattt
tRNA gene sequence 
GCCCTTGTAGCTCAGTTGGCAGAGCATATCCATGGTAAGGATAAGGTCAACAGTTCGATT
CTGTTCGAGGGCTCgg
Downstream region at tRNA end position 
agtggtagga
Secondary structure (Cloverleaf model)
>C11122969	Thr	GGT
                   t      TCgg agtggtagga
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     T + G
                     G - C          T T
                    T     T T G T C     A
      T G A        A      | | | | |     G
    T       C T C G       A A C A G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTC
                    T - A
                    A - T
                    T - A
                    C - G
                    C - G
                  A       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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