The detailed information of tRNA gene sequence


Sequence ID>W11121709
Genome IDADOJ01000020
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesActinobacillus pleuropneumoniae serovar 10 str. D13039 [ADOJ]
Start position on genome 29024
End posion on genome 28930
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cacagtgagt
tRNA gene sequence 
GGTGAGATGGCCGAGCAGGCTGAAGGCGCTCCCCTGCTAAGGGAGTATAGGGTTCAAAAG
CTCTATCGAGGGTTCGAATCCCTCTCTCACCGCCA
Downstream region at tRNA end position 
tttactttat
Secondary structure (Cloverleaf model)
>W11121709	Ser	GCT
                   t      GCCA tttactttat
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    A C G A        G      | | | | |     G
  G         G C C G       G A G G G     C
  G           | | |                 T T
  C         A G G C
    T G A          G     TATAGGGTTCAAAAGCTCTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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