The detailed information of tRNA gene sequence


Sequence ID>C11123053
Genome IDCP001962
Search identical group
Phylum/ClassDeinococcota
SpeciesThermus scotoductus SA-01 [CP001962]
Start position on genome 1875703
End posion on genome 1875779
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tttctggcgt
tRNA gene sequence 
GGGCCGTTAGCTCAATCGGTCAGAGCGGCCGGCTCATAACCGGTTGGTTGCAGGTTCAAG
TCCTGCACGGCCCACCA
Downstream region at tRNA end position 
gcgccctatc
Secondary structure (Cloverleaf model)
>C11123053	Met	CAT
                   t      ACCA gcgccctatc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A          T G
                    T     C G T C C     A
      T A A        A      | | | | |     A
    C       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        G     TGGTT
                    G + T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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