The detailed information of tRNA gene sequence


Sequence ID>C11123054
Genome IDCP001962
Search identical group
Phylum/ClassDeinococcota
SpeciesThermus scotoductus SA-01 [CP001962]
Start position on genome 1890634
End posion on genome 1890710
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
ctttgcgcgc
tRNA gene sequence 
CGGGGAGTAGCGCAGCCTGGTAGCGCACACGCTTGGGGTGCGTGTGGTCGTCGGTTCAAA
TCCGGCCTCCCCGACCA
Downstream region at tRNA end position 
aaaacccccg
Secondary structure (Cloverleaf model)
>C11123054	Pro	GGG
                   c      ACCA aaaacccccg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C G G C C     A
      C G A        A      | + | | |     A
    C       C G C G       G T C G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     TGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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