The detailed information of tRNA gene sequence


Sequence ID>C11123064
Genome IDCP001962
Search identical group
Phylum/ClassDeinococcota
SpeciesThermus scotoductus SA-01 [CP001962]
Start position on genome 2234843
End posion on genome 2234751
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cagaaggctt
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTCGAAGGCGGCACCCTGCTAAGGTGTTGTACCGGGAAAACCG
GTACCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
gaaagcccgg
Secondary structure (Cloverleaf model)
>C11123064	Ser	GCT
                   t      GCCA gaaagcccgg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TGTACCGGGAAAACCGGTACC
                    G + T
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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