The detailed information of tRNA gene sequence


Sequence ID>C11123067
Genome IDCP001962
Search identical group
Phylum/ClassDeinococcota
SpeciesThermus scotoductus SA-01 [CP001962]
Start position on genome 1848477
End posion on genome 1848385
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cccggctcaG
tRNA gene sequence 
GGAGGGGTGCCGGAGCGGTTGAACGGGCCGGTCTCGAAAACCGGTAGGCCCCCCAAGGGG
TCTCGCGGGTTCGAATCCCGCCCCCTCCGCCA
Downstream region at tRNA end position 
aaggcggcct
Secondary structure (Cloverleaf model)
>C11123067	Ser	CGA
                   G      GCCA aaggcggcct
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       G G C C       G C G G G     C
    G         | | |                 T T
    T       A C G G
      T G A        G     TAGGCCCCCCAAGGGGTCTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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