The detailed information of tRNA gene sequence


Sequence ID>C11123069
Genome IDCP001962
Search identical group
Phylum/ClassDeinococcota
SpeciesThermus scotoductus SA-01 [CP001962]
Start position on genome 1608442
End posion on genome 1608368
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ccctaggctt
tRNA gene sequence 
GGGGCGGTAGCTCAGAGGGAGAGCACCCGCCTTGCAAGCGGGAGGTCCGGGGTTCAAATC
CCCGCCGCTCCACCA
Downstream region at tRNA end position 
gcttggggac
Secondary structure (Cloverleaf model)
>C11123069	Ala	TGC
                   t      ACCA gcttggggac
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     G C C C C     A
        G A        A      | | | | |     A
      A     C T C G       C G G G G     C
      G     | | | |                 T T
      G     G A G C
        G A        A     AGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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