The detailed information of tRNA gene sequence


Sequence ID>C11123102
Genome IDCP002631
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema succinifaciens DSM 2489 [CP002631]
Start position on genome 2628774
End posion on genome 2628700
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aatatatttT
tRNA gene sequence 
AGGTCAGTAGCTCAGTTGGTAGAGTCCCGGTCTCCAAAACCGGTTGTCGCGGGTTCGAGT
CCTGCCTGGCCTGTta
Downstream region at tRNA end position 
atttacaaaa
Secondary structure (Cloverleaf model)
>C11123102	Trp	CCA
                   T      GTta atttacaaaa
                     A - T
                     G - C
                     G - C
                     T + G
                     C - G
                     A - T
                     G - C          T G
                    T     C G T C C     A
      T G A        A      | | + | |     G
    T       C T C G       G C G G G     C
    G       | | | +                 T T
    G       G A G T
      T A          C     TTGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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