The detailed information of tRNA gene sequence


Sequence ID>C11123105
Genome IDCP002631
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema succinifaciens DSM 2489 [CP002631]
Start position on genome 2559460
End posion on genome 2559371
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttagggaatt
tRNA gene sequence 
GGAGGCGTTGTAGAGCGGTTAATACAACGGTTTGCTAAACCGTCGGTTCCCTAAAGGGCC
GGGCAGGTTCGACTCCTGTCGCCTCCGCTA
Downstream region at tRNA end position 
ctaaacaggt
Secondary structure (Cloverleaf model)
>C11123105	Ser	GCT
                   t      GCTA ctaaacaggt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T C
                    T     T G T C C     A
      C G A        T      + | | | |     G
    G       G A T G       G C A G G     C
    G         | | |                 T T
    T       A T A C
      T A          A     CGGTTCCCTAAAGGGCCGG
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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