The detailed information of tRNA gene sequence


Sequence ID>C11123123
Genome IDCP002351
Search identical group
Phylum/ClassThermotogota
SpeciesPseudothermotoga thermarum DSM 5069 [CP002351]
Start position on genome 8364
End posion on genome 8438
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
ttggtgtgat
tRNA gene sequence 
GGGTGCGTAGCTCAGGGGGAGAGCGCTTCCCTCACGAGGAAGAGGTCGCAGGTTCGATTC
CTGCCGCACCCACCA
Downstream region at tRNA end position 
gtttttaaat
Secondary structure (Cloverleaf model)
>C11123123	Val	CAC
                   t      ACCA gtttttaaat
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     C - G
                     G - C          T T
                    T     C G T C C     A
        G A        A      | | | | |     G
      G     C T C G       G C A G G     C
      G     | | | |                 T T
      G     G A G C
        G A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  C       A
                  T       G
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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