The detailed information of tRNA gene sequence


Sequence ID>C11123124
Genome IDCP002351
Search identical group
Phylum/ClassThermotogota
SpeciesPseudothermotoga thermarum DSM 5069 [CP002351]
Start position on genome 22197
End posion on genome 22273
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gaaagtgtgt
tRNA gene sequence 
CGGGGCGTAGCGCAGACGGCTAGCGCGCCTGCCTTGGGAGCAGGAGGTCGCTGGTTCAAG
TCCAGTCGCCCCGACCA
Downstream region at tRNA end position 
ttttttattt
Secondary structure (Cloverleaf model)
>C11123124	Pro	TGG
                   t      ACCA ttttttattt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     T G A C C     A
      A G A        A      + | | | |     A
    C       C G C G       G C T G G     C
    G       | | | |                 T T
    G       G C G C
      C T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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