The detailed information of tRNA gene sequence


Sequence ID>C11123129
Genome IDCP002351
Search identical group
Phylum/ClassThermotogota
SpeciesPseudothermotoga thermarum DSM 5069 [CP002351]
Start position on genome 406322
End posion on genome 406399
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
aaagcagagt
tRNA gene sequence 
CGGGGCGTGGCGCAGGTTGGCTAGCGCGCTTGCATGGGGCGCAAGAGGTCGCTGGTTCAA
GTCCAGTCGCCCCGACCA
Downstream region at tRNA end position 
gcgggaggca
Secondary structure (Cloverleaf model)
>C11123129	Pro	GGG
                   t      ACCA gcgggaggca
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     T G A C C     A
    T G G A        G      + | | | |     A
  T         C G C G       G C T G G     C
  G         | | | |                 T T
  G         G C G C
    C T A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       C
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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