The detailed information of tRNA gene sequence


Sequence ID>C11123143
Genome IDCP002351
Search identical group
Phylum/ClassThermotogota
SpeciesPseudothermotoga thermarum DSM 5069 [CP002351]
Start position on genome 1815380
End posion on genome 1815456
Amino Acid Arg
Anticodon GCG
Upstream region at tRNA start position 
ccgccagctc
tRNA gene sequence 
GTGCCCGTAGCTCAGCTGGATAGAGCGCCAGACTGCGGATCTGGAGGTCGGGAGTTCAAA
TCTCCCCGGGCACGCCA
Downstream region at tRNA end position 
aggttgcgtt
Secondary structure (Cloverleaf model)
>C11123143	Arg	GCG
                   c      GCCA aggttgcgtt
                     G - C
                     T - A
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C C C T C     A
      C G A        A      | | | | |     A
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    G C G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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