The detailed information of tRNA gene sequence


Sequence ID>C11123144
Genome IDCP002351
Search identical group
Phylum/ClassThermotogota
SpeciesPseudothermotoga thermarum DSM 5069 [CP002351]
Start position on genome 1890899
End posion on genome 1890975
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atatattaac
tRNA gene sequence 
GGCGGTGTAGCTCAGGTGGTTAGAGCGAGTGATTCATAATCACTATGTCGTGGGTTCGAG
TCCCACCGCCGCCACCA
Downstream region at tRNA end position 
ggggcttttg
Secondary structure (Cloverleaf model)
>C11123144	Met	CAT
                   c      ACCA ggggcttttg
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T + G
                     G - C          T G
                    T     C A C C C     A
      G G A        A      | | | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     ATGTC
                    A - T
                    G - C
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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