The detailed information of tRNA gene sequence


Sequence ID>C11123156
Genome IDCP002351
Search identical group
Phylum/ClassThermotogota
SpeciesPseudothermotoga thermarum DSM 5069 [CP002351]
Start position on genome 1259640
End posion on genome 1259564
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
gcccgctcca
tRNA gene sequence 
GCGCCCGTAGCTCAACAGGATAGAGCATCGGACTTCTAATCCGAGGGTTGTGGGTTCGAC
TCCCGCCGGGCGCACCA
Downstream region at tRNA end position 
gctgtggtga
Secondary structure (Cloverleaf model)
>C11123156	Arg	TCT
                   a      ACCA gctgtggtga
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T C
                    T     C G C C C     A
      C A A        A      | + | | |     G
    A       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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