The detailed information of tRNA gene sequence


Sequence ID>C11123158
Genome IDCP002351
Search identical group
Phylum/ClassThermotogota
SpeciesPseudothermotoga thermarum DSM 5069 [CP002351]
Start position on genome 1259475
End posion on genome 1259399
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
cccaaagggc
tRNA gene sequence 
GCGCCTGTAGCTCAATTGGATAGAGCGTCGGACTTCGGATCCGATGGTTGCGGGTTCAAG
TCCTGCCAGGCGCGCCA
Downstream region at tRNA end position 
aatggttagt
Secondary structure (Cloverleaf model)
>C11123158	Arg	TCG
                   c      GCCA aatggttagt
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     C G T C C     A
      T A A        A      | | + | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     TGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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