The detailed information of tRNA gene sequence


Sequence ID>C11123160
Genome IDCP002351
Search identical group
Phylum/ClassThermotogota
SpeciesPseudothermotoga thermarum DSM 5069 [CP002351]
Start position on genome 1189305
End posion on genome 1189219
Amino Acid Leu
Anticodon GAG
Upstream region at tRNA start position 
gtgttgtagt
tRNA gene sequence 
GCCGAGGTGGCGGAATTGGCAGACGCGCATGGTTGAGGTCCATGTGGGTTCTAGCCCGTG
CGGGTTCAAGTCCCGCCCTCGGCACCA
Downstream region at tRNA end position 
accccgccaa
Secondary structure (Cloverleaf model)
>C11123160	Leu	GAG
                   t      ACCA accccgccaa
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T G
                    T     C G C C C     A
      T A A        G      | | | | |     A
    T       G G C G       G C G G G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TGGGTTCTAGCCCGT
                    C - G
                    A - T
                    T - A
                    G - C
                    G - C
                  T       T
                  T       G
                    G A G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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