The detailed information of tRNA gene sequence


Sequence ID>C11123163
Genome IDCP002351
Search identical group
Phylum/ClassThermotogota
SpeciesPseudothermotoga thermarum DSM 5069 [CP002351]
Start position on genome 1020704
End posion on genome 1020617
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
ggtcaccagc
tRNA gene sequence 
GCGAGAGTGGCGGAACTGGCAGACGCGCTGGACTTAGAATCCAGTGGACGATGAGTCCGT
GTGGGTTCAAGTCCCACCTCTCGCACCA
Downstream region at tRNA end position 
aagatgcggg
Secondary structure (Cloverleaf model)
>C11123163	Leu	TAG
                   c      ACCA aagatgcggg
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C          T G
                    T     C A C C C     A
      C A A        G      | | | | |     A
    T       G G C G       G T G G G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TGGACGATGAGTCCGT
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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