The detailed information of tRNA gene sequence


Sequence ID>C11123207
Genome IDCP002777
Search identical group
Phylum/ClassDeinococcota
SpeciesThermus thermophilus SG0.5JP17-16 [CP002777]
Start position on genome 457769
End posion on genome 457683
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
gggtgcgtcc
tRNA gene sequence 
GCCGGGGTGGCGGAACCGGTAGACGCGGCAGACTCAAAATCTGCTGTCCGCAAGGACGTG
CGGGTTCGAGTCCCGCCCCCGGCACCA
Downstream region at tRNA end position 
aggggcccct
Secondary structure (Cloverleaf model)
>C11123207	Leu	CAA
                   c      ACCA aggggcccct
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     C G C C C     A
      C A A        G      | | | | |     G
    C       G G C G       G C G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGTCCGCAAGGACGT
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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