The detailed information of tRNA gene sequence


Sequence ID>C11123576
Genome IDCP002417
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesVariovorax paradoxus EPS [CP002417]
Start position on genome 2164694
End posion on genome 2164769
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
tattccggtg
tRNA gene sequence 
GGGTGCTTAGCTCAGTTGGTAGAGCGGCGCCCTTACAAGGCGTAGGTCGGGGGTTCGAGC
CCCTCAGCACCCACCA
Downstream region at tRNA end position 
ccacccagat
Secondary structure (Cloverleaf model)
>C11123576	Val	TAC
                   g      ACCA ccacccagat
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     C - G
                     T - A          C G
                    T     C T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    G + T
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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