The detailed information of tRNA gene sequence


Sequence ID>C11123577
Genome IDCP002417
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesVariovorax paradoxus EPS [CP002417]
Start position on genome 2169114
End posion on genome 2169189
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
gggctctgcg
tRNA gene sequence 
GTGGCTGTAGCTCAGCTGGTAGAGTCCCAGATTGTGATTCTGGTCGTCGTGGGTTCGAGT
CCCATCAGCCACCCCA
Downstream region at tRNA end position 
acattttccg
Secondary structure (Cloverleaf model)
>C11123577	His	GTG
                   g      CCCA acattttccg
                     G - C
                     T - A
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T G
                    T     T A C C C     A
      C G A        A      + | | | |     G
    T       C T C G       G T G G G     C
    G       | | | +                 T T
    G       G A G T
      T A          C     TCGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  T       T
                  T       A
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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