The detailed information of tRNA gene sequence


Sequence ID>C11123590
Genome IDCP002417
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesVariovorax paradoxus EPS [CP002417]
Start position on genome 5431476
End posion on genome 5431400
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gtggcccagt
tRNA gene sequence 
GGGCCGTTAGCTCAGTTGGTTAGAGCAGCGGACTCATAATCCGTTGGTCGATGGTTCAAG
CCCATCACGGCCTACCA
Downstream region at tRNA end position 
ataattccac
Secondary structure (Cloverleaf model)
>C11123590	Met	CAT
                   t      ACCA ataattccac
                     G + T
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A          C G
                    T     C T A C C     A
      T G A        A      | | | | |     A
    T       C T C G       G A T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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