The detailed information of tRNA gene sequence


Sequence ID>C11123596
Genome IDCP002417
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesVariovorax paradoxus EPS [CP002417]
Start position on genome 4764797
End posion on genome 4764722
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ttctttcatc
tRNA gene sequence 
GTCTCGTTCGTCTAGCGGCCAGGACATCGGGTTTTCATCCCGAAGATCGTGGGTTCGAAT
CCCACACGAGGCTCCA
Downstream region at tRNA end position 
gcatttgatg
Secondary structure (Cloverleaf model)
>C11123596	Glu	TTC
                   c      TCCA gcatttgatg
                     G - C
                     T + G
                     C - G
                     T - A
                     C - G
                     G - C
                     T - A          T A
                    T     C A C C C     A
      C G A        C      | | | | |     G
    G       T C T G       G T G G G     C
    G       + | | |                 T T
    C       G G A C
      C A          A     AGATC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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