The detailed information of tRNA gene sequence


Sequence ID>C11123598
Genome IDCP002417
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesVariovorax paradoxus EPS [CP002417]
Start position on genome 4764424
End posion on genome 4764351
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ttgaatcttc
tRNA gene sequence 
GGCGCGGTAGCAAAGTGGCCATGCAACGGATTGCAAATCCGTCCAGCCCGGTTCGACTCC
GGGCCGCGCCTCCA
Downstream region at tRNA end position 
tttgggtgtt
Secondary structure (Cloverleaf model)
>C11123598	Cys	GCA
                   c      TCCA tttgggtgtt
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T C
                    T     G G G C C     A
        G A        A      | | | | |     G
      T     A A C G       C C C G G     C
      G       | | |                 T T
      G     A T G C
        C C        A     CCAG
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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