The detailed information of tRNA gene sequence


Sequence ID>C11300130
Genome IDFR687359
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesMycetohabitans rhizoxinica HKI 454 [FR687359]
Start position on genome 917202
End posion on genome 917280
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttgctgatcc
tRNA gene sequence 
GGGCCTCTAGCTCATGCTTGGTTAGAGCAGCGGACTCATAATCCGTTGGTGCCGTGTTCG
ACTCACGGGAGGCCCACCA
Downstream region at tRNA end position 
tatttcatgc
Secondary structure (Cloverleaf model)
>C11300130	Met	CAT
                   c      ACCA tatttcatgc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G          T C
                    T     G G C A C     A
    C G T A        A      | | | | |     G
  T         C T C G       C C G T G     C
  T         | | | |                 T T
  G         G A G C
    G T T A        A     TGGTG
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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