The detailed information of tRNA gene sequence


Sequence ID>C11300539
Genome IDCP002417
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesVariovorax paradoxus EPS [CP002417]
Start position on genome 708218
End posion on genome 708292
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
ttagacaaaa
tRNA gene sequence 
GCCCTTTTGGCTCAGTGGTAGAGCACTCCCTTGGTAAGGGAGAGGTCGCGGGTCCGATTC
CCGCAAAGGGCACCA
Downstream region at tRNA end position 
gtttctgggg
Secondary structure (Cloverleaf model)
>C11300539	Thr	GGT
                   a      ACCA gtttctgggg
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     T - A
                     T - A          T T
                    T     C G C C C     A
        G A        G      | | | | |     G
      T     C T C G       G C G G G     C
      G     | | | |                 T C
      G     G A G C
        T A        A     AGGTC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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