The detailed information of tRNA gene sequence


Sequence ID>W11125686
Genome IDADVR01000142
Search identical group
Phylum/ClassChloroflexota
SpeciesOscillochloris trichoides DG6 [ADVR]
Start position on genome 17025
End posion on genome 17116
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ccggctcgat
tRNA gene sequence 
GGGCAGGTCGCATAGTCCGGTCTAGTGCGCGGCACTGGAAATGCCGTACAGCAGCAATGC
TGTCGAGGGTTCGAATCCCTCCCTGCCCGCCA
Downstream region at tRNA end position 
catctcccct
Secondary structure (Cloverleaf model)
>W11125686	Ser	GGA
                   t      GCCA catctcccct
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    C T G A        C      | | | | |     G
  C         T A C G       G A G G G     C
  G         + | | |                 T T
  G         G T G C
    T C T A        G     TACAGCAGCAATGCTGTC
                    C - G
                    G - C
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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