The detailed information of tRNA gene sequence


Sequence ID>W11125827
Genome IDADVZ01000001
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesAfipia sp. 1NLS2 [ADVZ]
Start position on genome 292099
End posion on genome 292004
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
agaccttaac
tRNA gene sequence 
GGAAGAGCATCGTTCCCGGTGGGGCGTCCGGACTTCAAATCCGGGAAGGGCCGCGAGACG
GTTCTTGGTGGGTTCGACTCCCATTCTCTTCCGCCA
Downstream region at tRNA end position 
aatcctctct
Secondary structure (Cloverleaf model)
>W11125827	SeC(p)	TCA
                   c      GCCA aatcctctct
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C
                     C   T          T C
                    A     T A C C C     A
      C C C        T      + | | | |     G
    G       T T G C       G T G G G     C
    G       + + | |                 T T
    T       G G C G
      G G          T     GAAGGGCCGCGAGACGGTTCTTG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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