The detailed information of tRNA gene sequence


Sequence ID>W11125854
Genome IDADVZ01000005
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesAfipia sp. 1NLS2 [ADVZ]
Start position on genome 133386
End posion on genome 133302
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
tgtgtgctgc
tRNA gene sequence 
GCGCTCGTGGCGGAACTGGTAGACGCGCTGGGTTTAGGTTCCAGTGTCGAAAGATGTGGG
GGTTCGAGTCCCTCCGAGCGCACCA
Downstream region at tRNA end position 
accgccgttc
Secondary structure (Cloverleaf model)
>W11125854	Leu	TAG
                   c      ACCA accgccgttc
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T G
                    T     C T C C C     A
      C A A        G      | + | | |     G
    T       G G C G       G G G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGTCGAAAGATGT
                    C - G
                    T - A
                    G - C
                    G - C
                    G + T
                  T       T
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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