The detailed information of tRNA gene sequence


Sequence ID>W1511479500
Genome IDJWIF01000051
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesHalocynthiibacter namhaensis RA2-3 [JWIF]
Start position on genome 62105
End posion on genome 62181
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
cacccccagt
tRNA gene sequence 
GCCGCCTTAGCTCAGTTGGTTAGAGCGCCTGATTGTGGATCAGGAGGTCCCTGGTTCGAG
ACCAGGAGGTGGTACCA
Downstream region at tRNA end position 
tttctctctt
Secondary structure (Cloverleaf model)
>W1511479500	His	GTG
                   t      ACCA tttctctctt
                     G + T
                     C - G
                     C - G
                     G + T
                     C - G
                     C - G
                     T - A          A G
                    T     G G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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