The detailed information of tRNA gene sequence


Sequence ID>W1511479508
Genome IDJWIF01000059
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesHalocynthiibacter namhaensis RA2-3 [JWIF]
Start position on genome 7656
End posion on genome 7580
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
aatcctcagt
tRNA gene sequence 
CGGGGCGTAGCGCAGCCTGGTAGCGCGACGGTTTTGGGTACCGTAGGCCGCAAGTTCGAA
TCTTGCCGTCCCGACCA
Downstream region at tRNA end position 
catctcacca
Secondary structure (Cloverleaf model)
>W1511479508	Pro	TGG
                   t      ACCA catctcacca
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C          T A
                    T     C G T T C     A
      C G A        A      | | | | |     G
    C       C G C G       G C A A G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGCC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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