The detailed information of tRNA gene sequence


Sequence ID>W11134584
Genome IDAEEA01000018
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema primitia ZAS-1 [AEEA]
Start position on genome 25172
End posion on genome 25258
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aatgtaattT
tRNA gene sequence 
GGAGCGATGTCCGAGTGGTTGAAGGAGGCGGTCTTGAAAACCGTTGTGCCGCAAGGTACC
GGGGGTTCGAATCCCCCTTGCTCCGAta
Downstream region at tRNA end position 
ggttttgttt
Secondary structure (Cloverleaf model)
>W11134584	Ser	TGA
                   T      GAta ggttttgttt
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G + T
                     A - T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G G G G G     C
    G         | | |                 T T
    T       A G G A
      T G A        G     TGTGCCGCAAGGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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