The detailed information of tRNA gene sequence


Sequence ID>W11134585
Genome IDAEEA01000018
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema primitia ZAS-1 [AEEA]
Start position on genome 25325
End posion on genome 25412
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gttaactttg
tRNA gene sequence 
GGAGCGGTGGGTGAGTGGCCGAAACCAACGGTTTGCTAAACCGTCGTACCCTAACCGGGT
ACCGGGGGTTCGAATCCCCCCTGCTCCGtat
Downstream region at tRNA end position 
cgatgaggtt
Secondary structure (Cloverleaf model)
>W11134585	Ser	GCT
                   g      Gtat cgatgaggtt
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G + T
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G G G G G     C
    G         | | |                 T T
    C       A A C C
      C G A        A     CGTACCCTAACCGGGTACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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