The detailed information of tRNA gene sequence


Sequence ID>W11134603
Genome IDAEEA01000042
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema primitia ZAS-1 [AEEA]
Start position on genome 52924
End posion on genome 52998
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
tctgccctaT
tRNA gene sequence 
GGGGAATTAGCTCAGTTGGTAGAGCGATTGGTTCGCAATCAATAGGTCACCGGTTCGAAT
CCGGTATTCTCCAAta
Downstream region at tRNA end position 
cgtatctggt
Secondary structure (Cloverleaf model)
>W11134603	Ala	CGC
                   T      AAta cgtatctggt
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     A - T
                     T - A          T A
                    T     T G G C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    A - T
                    T - A
                    T - A
                    G - C
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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