The detailed information of tRNA gene sequence


Sequence ID>W11134604
Genome IDAEEA01000048
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema primitia ZAS-1 [AEEA]
Start position on genome 17906
End posion on genome 17831
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gtaatttagT
tRNA gene sequence 
GGGCCTTTGGCTCAGTTGGTTAGAGCTGCGGACTCATAATCCGTAGGTCCCTGGTTCAAG
TCCAGGAAGGCCCATta
Downstream region at tRNA end position 
aattactttt
Secondary structure (Cloverleaf model)
>W11134604	Met	CAT
                   T      ATta aattactttt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     T - A          T G
                    T     G G A C C     A
      T G A        G      | | | | |     A
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        T     AGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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