The detailed information of tRNA gene sequence


Sequence ID>W11134610
Genome IDAEEA01000058
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema primitia ZAS-1 [AEEA]
Start position on genome 159877
End posion on genome 159800
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
taaaacttaT
tRNA gene sequence 
GGGGGTGTAGTGAAGCTGGTTTATCACGCTGGCCTGTCAAGCCGGAGATCGCGGGTTCAA
GCCCCGTCGCTCCCGTCg
Downstream region at tRNA end position 
gaccaaacgg
Secondary structure (Cloverleaf model)
>W11134610	Asp	GTC
                   T      GTCg gaccaaacgg
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T + G
                     G - C          C G
                    T     T G C C C     A
    T C G A        A      + | | | |     A
  G         A G T G       G C G G G     C
  G         | | | |                 T T
  T         T C A C
    T T A          G     AGATC
                    C - G
                    T + G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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