The detailed information of tRNA gene sequence


Sequence ID>W11134623
Genome IDAEEA01000131
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema primitia ZAS-1 [AEEA]
Start position on genome 34022
End posion on genome 34110
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ccccgatatT
tRNA gene sequence 
GGAGCGGTGTCCGAGTGGCCGAAGGAGATGGTTTCGAAAACCATTGAACTCGCGAGGGTT
CCGGGGGTTCGAATCCCCCCTGCTCCGAag
Downstream region at tRNA end position 
aagcaggggg
Secondary structure (Cloverleaf model)
>W11134623	Ser	CGA
                   T      GAag aagcaggggg
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G + T
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G G G G G     C
    G         | | |                 T T
    C       A G G A
      C G A        G     TGAACTCGCGAGGGTTCC
                    A - T
                    T - A
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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