The detailed information of tRNA gene sequence


Sequence ID>W11134624
Genome IDAEEA01000131
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema primitia ZAS-1 [AEEA]
Start position on genome 34176
End posion on genome 34264
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tttctagttT
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGTCGAAGGTGCACGCTTGGAAAGCGTGTGTGCTTGAAAGAGTA
CCGGGGGTTCAAATCCCCCCCTCTCCGAaa
Downstream region at tRNA end position 
aagtattttc
Secondary structure (Cloverleaf model)
>W11134624	Ser	GGA
                   T      GAaa aagtattttc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     A
    G       G C C T       G G G G G     C
    G         | |                   T T
    T       A G G T
      C G A        G     TGTGCTTGAAAGAGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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